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Posts tagged with "biology"

kqedscience:

This Bacterium Can Do Division, Compute Logarithms And Take Square Roots
“A group of engineers from MIT have created analog calculators out of living cells, according to a paper published online in Nature yesterday. By tweaking the genes of bacterial cells, the researchers were able to create circuits that can perform calculations—including division, multiplication, logarithms and square roots—in a much more efficient way than many existing biocomputers.”

kqedscience:

This Bacterium Can Do Division, Compute Logarithms And Take Square Roots

A group of engineers from MIT have created analog calculators out of living cells, according to a paper published online in Nature yesterday. By tweaking the genes of bacterial cells, the researchers were able to create circuits that can perform calculations—including division, multiplication, logarithms and square roots—in a much more efficient way than many existing biocomputers.”

foolofanora:

neurosciencestuff:

‘Brainbow,’ version 2.0: Researchers refine breakthrough system for producing images of brain, nervous system
The breakthrough technique that allowed scientists to obtain one-of-a-kind, colorful images of the myriad connections in the brain and nervous system is about to get a significant upgrade.
A group of Harvard researchers, led by Joshua Sanes, the Jeff C. Tarr Professor of Molecular and Cellular Biology and Paul J. Finnegan Family Director, Center for Brain Science, and Jeff Lichtman, the Jeremy R. Knowles Professor of Molecular and Cellular Biology and Santíago Ramón y Cajal Professor of Arts and Sciences, has made a host of technical improvements in the “Brainbow” imaging technique. Their work is described in a May 5 paper in Nature Methods.
First described in 2007, the system combines three fluorescent proteins — one red, one blue, and one green — to label different cells with as many as 90 colors. By studying the resulting images, researchers were able to begin to understand how the millions of neurons in the brain are connected.
“‘Brainbow’ generated beautiful images of a kind we had never been able to obtain before, but it was difficult in some ways,” said Sanes, who also serves as director of the Center for Brain Science.
“These modifications aim to overcome some of the more problematic features of the original genetic constructs,” Lichtman said. “Lead author Dawen Cai, a research associate in our labs, worked hard and creatively to find ways to make the ‘Brainbow’ colors brighter, more variable, and useable in situations where the original gene constructs were hard to implement. Our first look at these animals suggests that these improvements are fantastic.”
Among the challenges faced by researchers using the original method, Sanes said, was the chance that certain colored proteins would bleach out faster than others.
“If one color bleaches faster than the others, you start with a ‘Brainbow,’ but by the time you’re done imaging, you might just have a ‘blue-bow,’ because the red and yellow bleach too fast,” he said.
Sanes said that some colors also were too dim, causing problems in the imaging process, while in other cases the protein didn’t fill the whole neuron evenly enough, or there was an overabundance of a certain color in an image.
“What we decided to do was to make the next generation of ‘Brainbow,’” Sanes said. “We systematically set out to look at these problems. We looked at a whole range of fluorescent proteins to find the ones that were brightest and wouldn’t bleach as much, and we developed new transgenic methods to avoid the predominance of a particular color.”
The researchers also explored new ways to create “Brainbow” images, including using viruses to introduce fluorescent proteins into cells.
The advantage of the new technique, Sanes said, is it offers researchers the chance to target certain parts of the brain and better understand how neurons radiate out to connect with other brain regions. Ultimately, he said, he hopes that other researchers are able to apply the techniques outlined in the paper in the same way that they expanded on the first “Brainbow” method.
“People adapted the method to study a number of interesting questions in other tissues to examine cellular relationships and cell lineages in kidney and skin cells,” he said. “It was also used to examine the nervous system in animals like zebrafish and C. elegans. With these new tools, I think we’ve taken the next step.”

WAIT OMG MY BIO PROFESSOR DISCOVERED THIS SHE IS AMAZEBALLS omg this is the coolest fucking thing

Awww yeah!! This is my neuroscience advisor!!

foolofanora:

neurosciencestuff:

‘Brainbow,’ version 2.0: Researchers refine breakthrough system for producing images of brain, nervous system

The breakthrough technique that allowed scientists to obtain one-of-a-kind, colorful images of the myriad connections in the brain and nervous system is about to get a significant upgrade.

A group of Harvard researchers, led by Joshua Sanes, the Jeff C. Tarr Professor of Molecular and Cellular Biology and Paul J. Finnegan Family Director, Center for Brain Science, and Jeff Lichtman, the Jeremy R. Knowles Professor of Molecular and Cellular Biology and Santíago Ramón y Cajal Professor of Arts and Sciences, has made a host of technical improvements in the “Brainbow” imaging technique. Their work is described in a May 5 paper in Nature Methods.

First described in 2007, the system combines three fluorescent proteins — one red, one blue, and one green — to label different cells with as many as 90 colors. By studying the resulting images, researchers were able to begin to understand how the millions of neurons in the brain are connected.

“‘Brainbow’ generated beautiful images of a kind we had never been able to obtain before, but it was difficult in some ways,” said Sanes, who also serves as director of the Center for Brain Science.

“These modifications aim to overcome some of the more problematic features of the original genetic constructs,” Lichtman said. “Lead author Dawen Cai, a research associate in our labs, worked hard and creatively to find ways to make the ‘Brainbow’ colors brighter, more variable, and useable in situations where the original gene constructs were hard to implement. Our first look at these animals suggests that these improvements are fantastic.”

Among the challenges faced by researchers using the original method, Sanes said, was the chance that certain colored proteins would bleach out faster than others.

“If one color bleaches faster than the others, you start with a ‘Brainbow,’ but by the time you’re done imaging, you might just have a ‘blue-bow,’ because the red and yellow bleach too fast,” he said.

Sanes said that some colors also were too dim, causing problems in the imaging process, while in other cases the protein didn’t fill the whole neuron evenly enough, or there was an overabundance of a certain color in an image.

“What we decided to do was to make the next generation of ‘Brainbow,’” Sanes said. “We systematically set out to look at these problems. We looked at a whole range of fluorescent proteins to find the ones that were brightest and wouldn’t bleach as much, and we developed new transgenic methods to avoid the predominance of a particular color.”

The researchers also explored new ways to create “Brainbow” images, including using viruses to introduce fluorescent proteins into cells.

The advantage of the new technique, Sanes said, is it offers researchers the chance to target certain parts of the brain and better understand how neurons radiate out to connect with other brain regions. Ultimately, he said, he hopes that other researchers are able to apply the techniques outlined in the paper in the same way that they expanded on the first “Brainbow” method.

“People adapted the method to study a number of interesting questions in other tissues to examine cellular relationships and cell lineages in kidney and skin cells,” he said. “It was also used to examine the nervous system in animals like zebrafish and C. elegans. With these new tools, I think we’ve taken the next step.”

WAIT OMG MY BIO PROFESSOR DISCOVERED THIS SHE IS AMAZEBALLS omg this is the coolest fucking thing

Awww yeah!! This is my neuroscience advisor!!

petergatsbygreen:

forevercryingbecausemerlin:

GROW DINOSAURS

We literally have an entire trilogy of movies that explain why that is a bad idea.

icy-brunette:

sharonjung:

vivalafashi0n:

celestexghost:

lohanthony:

This is Venus, a 3 year old chimera cat.
Chimera cat is one individual organism, but genetically its own fraternal twin. A chimera is typically formed from four parent cells (either two fertilized eggs, or two early embryos that have fused together). When the organism forms, the cells that had already begun to develop in the separate embryos keep their original phenotypes and appearances. This means that the resulting animal is a mixture of tissues and can look like this gorgeous (but bizarre) kitty.

It’s like a split personality that you can visually see.


I WANT SO BADLY

OMG

icy-brunette:

sharonjung:

vivalafashi0n:

celestexghost:

lohanthony:

This is Venus, a 3 year old chimera cat.

Chimera cat is one individual organism, but genetically its own fraternal twin. A chimera is typically formed from four parent cells (either two fertilized eggs, or two early embryos that have fused together). When the organism forms, the cells that had already begun to develop in the separate embryos keep their original phenotypes and appearances. This means that the resulting animal is a mixture of tissues and can look like this gorgeous (but bizarre) kitty.

It’s like a split personality that you can visually see.

I WANT SO BADLY

OMG

(Source: kennyisaliveinourhearts)

Mar 9

gingerkingdreaming:

thegoddamazon:

dragonsplash:

blaze-ferrari:

Evolution Simplified

This photoset should be required reading for every citizen.

FINALLY

This so much. If I had a dollar for every time some asshat said he wasn’t a fucking monkey, I’d be rich.

quantumaniac:

The Phylogenetic ’Tree of Life’

Charles Darwin proposed that phylogeny, the evolutionary relatedness among species through time, was expressible as a metaphor he termed the Tree of Life. The modern development of this idea is called the Phylogenetic tree.

beckybotsford:

whenever you feel sad just remember that there are billions of cells in your body and all they care about is you

(Source: gracehsong)

infinity-imagined:

The interior of a Eukaryotic Cell, from the outer membrane through the cytosol to the nucleus.  All molecular structures are colored by their function; the cytoskeleton is blue, membranes are green, ribosomes are purple, RNA and spliceosomes are pink, DNA and nucleosomes are yellow.  This cell is producing antibodies, all steps of the process are visualized in order from the bottom to the top of the image. 

First DNA is transcribed to RNA, and the RNA is spliced before leaving the nucleus through a nuclear poreTranslation begins when the RNA becomes bound to a ribosome, which converts the genetic sequence to a linear protein.  The proteins are folded and sorted inside the Golgi Complex, and then packaged into vesicles by the geodesic Clathrin Assembly.  These vesicles are pulled along microtubules by kinesin motors.  The vesicles then fuse with the outer membrane, and the antibodies are released into the bloodstream.

Illustration by David Goodsell

Nov 2

jtotheizzoe:

sciencepopularis:

Reddit’s mind-blowing sentences

So, a while back I saw a Reddit thread about mind-blowing sentences and what struck me was how many of the best had foundations in scientific disciplines, from human conciousness to genetics. Seeing these sentences, I couldn’t help but put together a nice album that I knew us Tumblrs would love.

In case the hydrogen one has you stumped, as reddit user ‘Propionate’ put it:

“Really hot plasma, Hydrogen, Big clouds of hydrogen, Big balls of hydrogen, stars, supernova, heavier elements like carbon, clouds of heavier elements, big balls of heavier elements, planets, life, humans”

Everyone should make it a point to think about something like this at least once a day.

(Source: sciencepopularis)